11062: ProteinView should take the taxonomy from the.11058: Use Parser in enumerating repeat search parameters.11057: export_dat_2.pl should not assume results file is in.11013: mzIdentML fails to validate with error: PeptideHypothesis: No match found for key-sequence.10862: Upgrade exported mzIdentML to version 1.1.0.10759: Need to export site analysis data.10757: ExecAfterSearch bugs relating to repeat arguments and environment variables.
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